The Complement System

Every day, our immune system protects us from harmful microbes and infections. Most of these challenges remain undetected due to the continuous protection provided by the complement system.

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What is the Complement system?

The complement system is an essential cascade of over 30 proteins that triggers powerful immune responses. When activated, it produces:

  • Anaphylatoxins (C3a, C5a) that orchestrate responses from chemoattraction to apoptosis
  • Membrane Attack Complex (MAC/C5b-9/TCC) that creates pores in pathogen membranes, causing cell death

Originally recognized for innate immunity, complement also activates adaptive immunity (T and B cells), maintains immunological memory, and plays roles in tissue regeneration, tumor growth, autoimmune disorders, kidney disease, neurodegeneration, and cancer.

How Was Complement Discovered?

How Was Complement Discovered?

In the late 1800s, Jules Bordet discovered serum factors that amplified antibody activity against bacteria: initially called alexin, cytase, or addiment before “complement” became standard. Early researchers observed a “midpiece” and “endpiece,” unknowingly documenting one of biology’s most sophisticated molecular cascades.

Today we recognize three distinct activation pathways: classical, lectin, and alternative—each offering unique therapeutic intervention opportunities.

How Complement Activation Works: Three Pathways Converging on One Goal

How Complement Activation Works: Three Pathways Converging on One Goal

Complement is activated upon recognition of pathogens or damage-associated molecular patterns (DAMPs), such as apoptotic or necrotic cells. The response proceeds through three pathways and a cascade of mostly inactive zymogens that are sequentially cleaved to mark and eliminate threats.

Think of complement activation as three alarm systems wired to the same response team, each triggered by different molecular mechanisms.

Related products

Explore our products today and take the next step in utilizing the power of complement science for breakthrough medical advancements.

  • H-FABP, Rat, ELISA kit-0

    Alternative Complement Pathway, Human, Assay

    Cross reactivity
    Monkey – Yes, Pig – Yes
    View product 741.00
  • H-FABP, Rat, ELISA kit-0

    Classical Complement Pathway, Human, Assay

    Cross reactivity
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  • TCC, Human, ELISA kit-0

    TCC ELISA, human, kit

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    Cynomolgus monkey – Yes, Horse – No, Mouse – No, Pig – Yes, Rabbit – Yes, Rat – No
    View product 756.00 1,223.00Price range: €756.00 through €1,223.00
  • Complement factor B, Human, ELISA kit-0

    Complement factor B, Human, ELISA kit

    Cross reactivity
    Horse – No, Mouse – No, Pig – No, Rat – No
    View product 894.00 1,443.00Price range: €894.00 through €1,443.00
  • Hycult Biotech antibody vials

    C5, Mouse, mAb BB5.1

    Application
    Frozen sections, Functional studies, Immuno assays, Immuno fluorescence, Immuno precipitation, Paraffin sections
    Cross reactivity
    Rat – Yes
    View product 133.00 44,308.00Price range: €133.00 through €44,308.00
  • MAC, Human, mAb B7

    MAC, Human, mAb B7

    Application
    Frozen sections, Immuno assays, Paraffin sections, Western blot
    View product 133.00 510.00Price range: €133.00 through €510.00
  • TCC, Rat, ELISA kit-0

    TCC, Rat, ELISA kit

    Cross reactivity
    Horse – No, Human – No, Mouse – No, Pig – No, Rabbit – No
    View product 825.00 1,359.00Price range: €825.00 through €1,359.00
  • C3b, Mouse, ELISA kit

    C3b, Mouse, ELISA kit

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    Human – No, Pig – No, Rat – No
    View product 894.00 1,443.00Price range: €894.00 through €1,443.00
  • 3 Complement Pathways


    The Classical Pathway: Antibody-Initiated Defense
    Initiated when C1q binds to antigen-associated IgM or IgG hexamers, forming immune complexes. This represents your adaptive immune system recruiting complement as a powerful amplification mechanism: antibodies mark the target, and complement destroys it.

    The Lectin Pathay: Pattern Recognition
    Activated upon recognition by specific molecules, including mannose-binding lectin (MBL), collectins, and ficolins). These pattern-recognition molecules bind to microorganism-associated molecular patterns (MAMPs) or carbohydrate structures on damaged cells, enabling immediate response without requiring prior antibody production.

    The Alternative Pathway: Constant Surveillance
    Undergoes continuous low-level activation through spontaneous C3 hydrolysis (“tick-over”), enabling rapid response on surfaces lacking proper regulation, typically non-host structures. Serves as both independent activation and powerful amplification loop for the other pathways.

    The Convergence Point: C3 Cleavage

    The Convergence Point: C3 Cleavage

    Irrespective of the initiating trigger, all complement activation pathways converge at the proteolytic cleavage of C3. Upon activation, C3 undergoes conformational changes, generating:

    • C3b (larger fragment): Opsonin that tags pathogens for destruction and builds downstream convertases
    • C3a (smaller fragment): Anaphylatoxin that promotes phagocytosis, cell migration, chemotaxis, and cytokine secretion

    The Terminal Pathway: MAC Formation and Cell Lysis

    The Terminal Pathway: MAC Formation and Cell Lysis

    When C3b is deposited at high density on a surface, it promotes formation of C5 convertases. C5 activation generates two critical products:

    • C5a: Potent anaphylatoxin with strong pro-inflammatory and immunomodulatory effects, including recruitment and activation of immune cells.
    • C5b: Initiates the sequential assembly of the multiprotein, cell membrane-perforating complex C5b-C9, also known as MAC (Membrane Attack Complex) or TCC (Terminal Complement Complex). MAC creates pores in cell membranes, ultimately resulting in cell death through osmotic lysis.

    Quick Summary: Complement activation is rapidly initiated by environmental or microbial signals and amplified primarily via the alternative pathway. While essential for defense, excessive activation causes tissue damage.

    The Critical Balance: Regulation Prevents Self-Destruction

    Complement is powerful and constantly active. Unchecked, it would destroy your own tissues as efficiently as pathogens.

    To prevent complement overactivation, the system is tightly regulated by soluble and membrane-bound proteins that serve as checkpoints limiting excessive activity. For each type of activated fragment, there is at least one inhibitor or inhibitory mechanism. These regulators act by accelerating breakdown of C3 and C5 convertases or by preventing MAC formation. Most regulators are encoded by genes located in the RCA (Regulators of Complement Activation) gene cluster.

    Fluid-Phase Regulators: Controlling Activation in Circulation

    Fluid-Phase Regulators: Controlling Activation in Circulation

    • C1-Inhibitor (C1-INH) regulates the classical pathway by stabilizing inactive C1 and preventing spontaneous activation. It binds irreversibly to active C1r and C1s, terminating their enzymatic activity, and also binds MASPs to halt lectin pathway activity.
    • Factor H is the primary soluble regulator of the alternative pathway, particularly important given continuous C3 activation through tick-over. It distinguishes host tissue from foreign surfaces by binding to glycosaminoglycans and oxidized self-ligands, preventing autoimmune-like complement attack.
    • Factor I cleaves C3b and C4b but requires specific cofactors (Factor H, CR1, MCP/CD46 for C3b; C4BP for C4b). Through proteolytic cleavage, Factor I neutralizes these components, preventing downstream cascade interactions.

    Membrane-Bound Regulators: Protecting Cell Surfaces

    Membrane-Bound Regulators: Protecting Cell Surfaces

    • CD46 acts as a cofactor for Factor I-mediated cleavage of C3b and C4b, providing localized protection on cell surfaces.
    • CD55 accelerates the decay of C3 and C5 convertases, preventing their assembly and shortening their functional lifespan.
    • CD59 blocks formation of MAC, providing the last line of defense against membrane attack even when upstream regulation fails.

    The Exception: Properdin as a Positive Regulator

    The Exception: Properdin as a Positive Regulator

    Notably, properdin (an oligomeric plasma glycoprotein) is the only known positive regulator of the complement system. It stabilizes C3 and C5 convertases and initiates alternative pathway activation. Properdin also has non-complement roles, such as interacting with natural killer cells, highlighting the system’s integration with broader immune networks.

    When Regulation Fails: Complement Dysregulation and Disease

    Insufficient regulation can lead to excessive activation, resulting in serious conditions such as thrombo-inflammation, immune dysregulation, vascular endothelial inflammation, and organ damage.

    Genetic or acquired deficiencies in complement inhibitors or their cofactors can disrupt balance of complement regulation, leading to uncontrolled activation characterized by persistent opsonization, MAC-mediated cell lysis, and chronic inflammation.

    Such dysregulation is associated with a range of immune-mediated diseases affecting the eyes, kidneys, blood, and nervous system.


    Emerging Clinical Applications and Associated Challenges

    Recent clinical milestones, such as the approval of eculizumab for generalized myasthenia gravis, underscore the system’s therapeutic versatility beyond traditional indications like atypical hemolytic uremic syndrome (aHUS). Complement modulation is now being explored in complex disorders:

    • Neurodegeneration (Alzheimer’s, ALS, Parkinson’s)
    • Autoimmune disorders (lupus, rheumatoid arthritis)
    • Ischemia-reperfusion injury
    • Transplant rejection
    • COVID-19-associated thromboinflammation
    • Cancer immunotherapy

    The challenge? Achieving localized modulation without systemic immunosuppression.

    The Measurement Challenge: Why Precision Matters

    The Measurement Challenge: Why Precision Matters

    Complement’s sensitivity makes it an excellent biomarker, but also makes it vulnerable to artificial activation during improper handling. Nearly half of published studies used improper sample handling (Brandwijk et al.), compromising results when clinical decisions depend on accuracy.


    The Three Critical Factors for Reliable Complement Measurement

    1. Proper Sample Handling

    1. Proper Sample Handling

    • Use EDTA plasma for activation products (C3a, C5a, sTCC). EDTA chelates calcium, freezing the cascade at collection and preserving true in vivo state.
    • Keep samples on ice immediately after collection
    • Process within 1 hour of venipuncture
    • Store at -80°C for long-term preservation
    • Avoid freeze-thaw cycles (each cycle degrades complement proteins)

     

    Why This Matters: Improper handling doesn’t just introduce variability, it fundamentally changes what you’re measuring, shifting from in vivo activation status to ex vivo artifacts.

    2. Standardization

    2. Standardization

    No universal protocols exist. Labs use different antibodies, reagents, and platforms. The result? Inconsistent results across studies and institutions, making comparisons nearly impossible.

    With complement-targeted therapies entering the market, standardized assays and handling protocols must become the norm. Physicians need reliable, comparable measurements to guide treatment decisions.

    3. Sensitivity and Specificity

    3. Sensitivity and Specificity

    To be clinically useful, assays must have both high sensitivity and high specificity.

    • Sensitivity: Detect low levels (ng/mL to µg/mL range)
    • Specificity: Detect correct components without cross-reactivity to related proteins

    Without sufficient sensitivity and specificity, complement measurements can easily be misleading, especially given the structural similarities between full proteins and their activation products.

    Want to Measure Complement Accurately?

    Since 1994, Hycult Biotech has addressed measurement challenges with assays and antibodies delivering reliable, reproducible results:

    • Low batch-to-batch variability through strict manufacturing controls
    • Validated specificity with published cross-reactivity data
    • Standardized protocols optimized through complement-specific expertise
    • Neo-epitope recognition targeting sites exposed only after activation

    Whether in research or clinical settings, our tools ensure your measurements reflect biology, not artifacts.

    Frequently asked questions

    Is there an overview of the complement system?

    Yes, we can provide you with a poster summarizing the entire pathway. For further reading regarding complement function, regulation and its role in disease, we recommend the following review papers: 

    Brandwijk Ricardo J. M. G. E. , Michels Marloes A. H. M. , van Rossum Mara , de Nooijer Aline H. , Nilsson Per H. , de Bruin Wieke C. C. , Toonen Erik J. M. ,Pitfalls in complement analysis: A systematic literature review of assessing complement activation, Frontiers in Immunology, Volume 13 – 2022, 2022, 10.3389/fimmu.2022.1007102

    Mastellos, D.C., Ricklin, D. & Lambris, J.D. Clinical promise of next-generation complement therapeutics. Nat Rev Drug Discov 18, 707–729 (2019). https://doi.org/10.1038/s41573-019-0031-6

    John P. Atkinson, Terry W. Du Clos, Carolyn Mold, Hrishikesh Kulkarni, Dennis Hourcade, Xiaobo Wu, 21 – The Human Complement System: Basic Concepts and Clinical Relevance, Editor(s): Robert R. Rich, Thomas A. Fleisher, William T. Shearer, Harry W. Schroeder, Anthony J. Frew, Cornelia M. Weyand, Clinical Immunology (Fifth Edition), Elsevier, 2019, Pages 299-317.e1, ISBN 9780702068966

    What are the functions of intracellular complement, and how do they differ from extracellular functions?

    Intracellular complement functions as an autonomous regulatory layer that modulates immune cell metabolism, survival, and inflammatory responses, operating inside lysosomes and mitochondria. In contrast, extracellular complement primarily functions in immune surveillance and pathogen elimination via the three pathways in plasma and tissues. A few examples in which intracellular complement differs from extracellular [3]: 

    Extracellular  Intracellular
    Activated in plasma/tissue fluids by classical, lectin, or alternative pathway Activated within lysosomes, cytosol, or mitochondria 
    Produces C3a/C5a and MAC for immune defence Produces C3a/C5a to regulate metabolism and inflammation
    Requires convertase formation for C3/C5 cleavage May bypass convertases, by using local proteases

     

    What are the main challenges in developing complement inhibitors for clinical use?

    Developing complement inhibitors for clinical use is challenging due to complex pathway crosstalk and activation bypass mechanisms. Non-canonical proteases such as thrombin or kallikrein can cleave C3 or C5 without convertases, allowing bypass activation. This can undermine the efficacy of convertase-targeting therapies [3]. Moreover, functional overlap between pathways enables activation even when one route is blocked. Another challenge lies in the genetic variation in regulatory proteins like factor H and CD46, which can alter disease susceptibility and patient response to therapy. Pathogens further complicate treatment by mimicking host complement regulators, enabling immune evasion. Intracellular complement activity adds complexity and raises questions about how complement inhibitors are expected to work in clinical practice.

    How does complement dysregulation contribute to the pathogenesis of diseases like aHUS or C3 glomerulopathy?

    Complement dysregulation plays a central role in the development of aHUS and C3 glomerulopathy. In these diseases, uncontrolled alternative pathway activation leads to excessive C3 fragment deposition on host tissue.  This results from mutations or autoantibodies affecting regulators such as factor H, factor I, CD46, or factor H-related proteins. In aHUS, factor H variants often cluster in the C-terminal domains responsible for host-surface recognition.  This impairs regulation on endothelial cells, promoting thrombotic microangiopathy. In contrast, C3 glomerulopathy-associated variants localize to N-terminal domains affecting fluid-phase C3 regulation. The imbalance causes persistent C3b deposition  and complement amplification in the glomerular basement membrane. (The glomerular basement membrane is an extracellular matrix in the kidney.) This drives inflammation, tissue injury, and renal dysfunction. Both diseases reflect distinct but overlapping signatures of alternative pathway dysregulation. Genetic insights from patients have clarified how regulatory defects trigger complement-mediated kidney pathology. [3]

    What diseases are linked to complement system dysfunction?

    Numerous diseases have been associated with complement system dysfunction. Below is a selection of some widely discussed examples: 

    • Kidney-Related Diseases (C3G, Lupus Nephritis, aHUS, MN): Characterized by complement dysregulation, immune complex formation, and inflammation, leading to glomerular damage, renal dysfunction, and progressive kidney disease.
    • Hematological Disorders (PNH, AIHA, TMA): Conditions involving red blood cell destruction, thrombotic complications, and hemolytic anemia due to impaired complement regulation and immune system dysfunction.
    • Neurological Diseases (Multiple Sclerosis, Alzheimer’s Disease, NMOSD, MMN, ALS, Parkinson’s Disease): Chronic neuroinflammatory and neurodegenerative disorders where complement activation contributes to neuronal damage, demyelination, and disease progression.
    • Sepsis, SIRS & Ischemia-Reperfusion Injury (IRI): Dysregulated immune activation leading to systemic inflammation, organ dysfunction, and tissue ischemia, relevant in conditions such as stroke, myocardial infarction, and trauma.
    • Systemic Autoimmune Disorders (SLE, TMA-related conditions): Autoantibody formation and complement activation drive widespread inflammation, immune complex deposition, and increased disease severity.
    • Oncology & Tumor Progression: Complement activation, particularly TCC formation, plays a role in the tumor microenvironment, influencing immune evasion, chronic inflammation, and cancer progression. Complement inhibitors are being explored as potential therapeutic strategies in oncology.
    Why is the complement system important for therapeutic research?

    Because of the large number of complement-mediated diseases and recent advancements in large-scale genomics and proteomic research, interest in the complement system has been revitalized, especially as a promising target for therapeutic intervention. This was demonstrated more than a decade ago by eculizumab (Soliris, Alxion), the first complement-specific drug designed to inhibit the key complement component C5.

    What strategies exist for the therapeutic modulation of the complement system?

    Therapeutic strategies can target different levels of the complement pathway to prevent or control excessive activation. A central approach is the use of monoclonal antibodies against C5, such as eculizumab, to prevent C5a and membrane attack complex formation. Compstatin analogues act upstream by inhibiting C3 activation, blocking both opsonization and downstream amplification. To target the alternative pathway specifically, inhibitors of factor B or factor D disrupt its amplification loop. Some therapies interfere with convertase assembly or stability, thereby reducing the generation of effector molecules. C5a receptor (C5aR1) antagonists selectively block inflammatory signaling without affecting upstream complement functions. Complement regulation can also be restored by engineered regulators that mimic the activity of proteins like factor H or CD46. These specific targeted deliveries improve a way to modulate complement activity.

    What research tools are available at Hycult Biotech?

    The complement system plays an important role in therapeutic research because of its contribution in immune defense, inflammation, and disease pathology. Malfunction of complement activity contributes to autoimmune diseases, inflammatory disorders, neurodegeneration, cancer, and infectious diseases, making it an interesting target for drug development.

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